Workshop Lab Tutorials

• Cell Mechanics Lab
• Mechanical Properties of Viruses with AFM
• High Throughput Thermal Microbead Rheology Lab
• Single Molecule Spectroscopy of Fibrin with AFM Lab
• Microfluidics Basics Lab
• Microfluidics-Based Adhesion Assay Lab
• Fibrin-Stretching Lab
• Optical Tweezers Lab
• Diffusion In Fibrin Clots Lab

Software Tutorials

Tutorials are available online for the following CISMM-sponsored software.

ImageSurfer

• ImageSurfer 2 Tutorials
• Dendritic Spines
• Volume Rendering

ImageTracker

• Image Stabilization
• Removal of Stationary Image Components

Microscope Simulator

• Simulating a Fluorescent Bead

Video Optimizer

• Actin Motility
• Spindle Dynamics

Video Spot Tracker

• Bead Rheology
• Bead attached to cilia against background of cells
• Magnetic Bead Calibration
• Rod-shaped Bacteria Tracking
• Kymograph

Edge Detector 1D

• Finding edges in a FRET sample

Template-Based Matching

• Distribution of angles in dimer proteins

PlotExtractor

• Recovering data from a published plot

Network Extractor

• Calculate fiber segment orientation histograms from a 3D image of fibrin

Landmark/Fiducial based Registration Toolbox

• http://cismm.web.unc.edu/resources/tutorials/landmarkfiducial-based-registration-toolbox/